WDL and Docker scripts for GATK de novo mutation variant calling

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GATK de novo mutation variant calling (Testing and statistics) GATK de novo mutation variant calling (Testing and statistics)
WGS Variant Calling: Variant calling with GATK - Part 1 | Detailed NGS Analysis Workflow WGS Variant Calling: Variant calling with GATK - Part 1 | Detailed NGS Analysis Workflow
Next-Generation Variant Calling Workflow Part 2 Next-Generation Variant Calling Workflow Part 2
GATK installation on Centos 7.4 GATK installation on Centos 7.4
NGS-Intro 10: Variant Calling Workflow | GATK Best Practices NGS-Intro 10: Variant Calling Workflow | GATK Best Practices
Variant calling pipeline in Shiny R using docker image Variant calling pipeline in Shiny R using docker image
Somatic Variant Calling with Mutect2 | GATK Best Practices Tutorial Somatic Variant Calling with Mutect2 | GATK Best Practices Tutorial
BroadE: GATK - Introduction to Germline Variant Discovery BroadE: GATK - Introduction to Germline Variant Discovery